JORF n°0231 du 4 octobre 2019

ANNEXE
LISTE DES ESPÈCES MODÈLE POUR LA RECHERCHE

Consultable à l'adresse électronique http://www.enseignementsup-recherche.gouv.fr/, rubrique " recherche ", sous-rubrique " encadrement des pratiques de recherche " ou par simple demande auprès des services du ministre chargé de la recherche. Cette liste peut être révisée en fonction de l'évolution des pratiques de la recherche.

| Genre | Espèces Modèles | |-------------------|-------------------------------------------------------------------------| | VIRUS | | | Alfamovirus | Alfalfa mosaic virus | | Alfatorquevirus | Torque Teno Virus (TTV) | | Alfatorquevirus | Torque Teno Midi Virus (TTMDV) | | Alfatorquevirus | Torque Teno Mini Virus (TTMV) | | Alphabaculovirus | Autographa california multiple nucleopolyhedrovirus | | Alphabicaudavirus | Acidianus (ATV) | | Alphacoronavirus | Alphacoronavirus 1 | | Alphacoronavirus | Human coronavirus 229E | | Alphacoronavirus | Human coronavirus NL63 | | Alphacoronavirus | Porcine Respiratory Corona Virus | | Alphacoronavirus | Feline Infectious Peritonitis virus | | Alphacoronavirus | Porcine epidemic diarrhea virus (PEDV) | | Alphanodavirus | Flock House virus | |Alphapapillomavirus| Human papillomavirus | | Alpharetrovirus | Avian leukosis virus | |Alphatristromavirus| Pyrobaculum (PSV1) | | Alphavirus | Ross River virus | | Alphavirus | Salmon pancreas disease virus | | Alphavirus | Bebaru Virus | | Alphavirus | Everglades Virus | | Alphavirus | Mayaro virus | | Alphavirus | Mucambo virus | | Alphavirus | Ndumu virus | | Alphavirus | Tonate virus | | Alphavirus | Chikungunya virus | | Alphavirus | Eastern equine encephalitis virus | | Alphavirus | O'nyong-nyong virus | | Alphavirus | Semliki Forest virus | | Alphavirus | Sindbis virus | | Alphavirus | Venezuelan equine encephalitis virus | | Alphavirus | Western equine encephalitis virus | | Alphavirus | Rubella virus | | Ampelovirus | Little cherry virus 2 | | Ampullavirus | Acidianus (ABV) | | Aparavirus | Acute bee paralysis virus | | Aphthovirus | Foot-and-mouth disease virus | | Aquabirnavirus | Infectious Pancreatic Necrosis virus | | Aquamavirus | Aquamavirus A | | Arenavirus | Lymphocytic choriomeningitis virus | | Arenavirus | Guanarito virus | | Arenavirus | Junin virus | | Arenavirus | Lassa virus | | Arenavirus | Lujo virus | | Arenavirus | Machupo virus | | Arenavirus | Mopeia virus | | Arterivirus | Equine arteritis virus | | Asfarivirus | African swine fever virus | | Avastrovirus | Turkey astrovirus | | Avibirnavirus | Infectious Bursal disease virus | | Avihepadnavirus | Duck hepatitis B virus | | Avihepatovirus | Avihepatovirus A | | Avipoxvirus | Fowlpox virus | | Avulavirus | Newcastle disease virus | | Babuvirus | Banana bunchy top virus | | Badnavirus | Banana streak virus | | Badnavirus | Cacao swollen shoot virus | | Begomovirus | African cassava mosaic virus | | Begomovirus | Tomato yellow leaf virus | | Begomovirus | Tomato yellow leaf curl virus | | Begomovirus | Pepper yellow vein Mali virus | | Begomovirus | African cassava mosaic virus | | Begomovirus | East African cassava Kenya virus | | Begomovirus | South African cassava mosaic virus | | Benyvirus | Beet necrotic yellow vein virus | | Benyvirus | Beet soil-borne mosaic virus | | Betacoronavirus A | Murine coronavirus | | Betacoronavirus A | Human coronavirus HKU1 | | Betacoronavirus A | Human coronavirus OC43 | | Betacoronavirus A | Bovine Coronavirus | | Betacoronavirus B | SARS coronavirus | | Betacoronavirus B | SARS related Rh bat CoV HKU3 | | Betacoronavirus B | SARS related Rh civet coronavirus | | Betacoronavirus C | MERS coronavirus | | Betacoronavirus C | NeoCoV | |Betalipiothrixvirus| Acidianivirus (AFV3, AFV6, AFV7, AFV8) | | Betaretrovirus | Mouse Mammary tumor virus | | Bocaparvovirus | Human bocavirus | | Bornavirus | Borna disease virus | | Bromovirus | Brome mosaic virus | | Capillovirus | Cherry virus A | | Capripoxvirus | Sheeppox virus | | Capulavirus | Alfalfa leaf curl virus | | Cardiovirus | Cardiovirus A-C | | Caulimovirus | Banana streak virus | | Caulimovirus | Cauliflower mosaic virus | | Circovirus | Porcine circovirus 1 & 2 | | Clavavirus | Aeropyrum pernix (PBV1) | | Closterovirus | Citrus tristeza virus | | Comovirus | Cowpea mosaic virus | | Cosavirus | Cosavirus A | | Cripavirus | Drosophila C virus | | Cripavirus | Cricket paralysis virus | | Cucumovirus | Cucumber mosaic virus | | Cytomegalovirus | Human betaherpesvirus 5 | |Deltalipothrixvirus| Acidianus (AFV2) | | Deltapolyomavirus | Human polyomavirus 6 | | Deltaretrovirus | Bovine Leukemia virus | | Deltaretrovirus | Human T cell leukemia virus | | Deltavirus | Hepatitis Delta virus | | Dicipivirus | Cadicivirus A | | Ebolavirus | | | Ectromelia | virus | | Enterovirus | Enterovirus A à J | | Enterovirus | Rhinovirus A à C | | Entomobirnavirus | Drosophila X virus | | Ephemerovirus | Bovine fever ephemerovirus | | Erbovirus | Erbovirus A | | Erythrovirus | Human parvovirus B19 | | Fabavirus | Arabis mosaic virus | | Felix01virus | Salmonlla virus Felix01, Escherichia viruswV8 | | Flavivirus | Alkhurma virus | | Flavivirus | Muray valley encephalitis virus | | Flavivirus | Carey Island virus | | Flavivirus | Dakar bat virus | | Flavivirus | Dengue virus | | Flavivirus | Hypr virus | | Flavivirus | Ilheus virus | | Flavivirus | Japanese encephalitis virus | | Flavivirus | Kyasanur forest disease virus | | Flavivirus | Louping ill virus | | Flavivirus | Omsk hemorrhagic fever virus | | Flavivirus | Powassan virus | | Flavivirus | Rio Bravo virus | | Flavivirus | Rocio | | Flavivirus | St. Louis encephalitis virus | | Flavivirus | Tick-borne encephalitis virus | | Flavivirus | Verno-estivale russe encephalitis | | Flavivirus | Wesselsbron virus | | Flavivirus | West Nile virus | | Flavivirus | Yellow fever virus | | Flavivirus | Zika virus | | Foveavirus | Apricot latent virus | | Furovirus | Beet necrotic yellow vein virus | | Fusellovirus | Sulfolobus (SSV5, SSV6), Aeropyrum (APSV1), Acidianus (ASV1) | | Gallivirus | Gallivirus A | | Gamma retrovirus | Murine leukemia virus | | Gammacoronavirus | Avian infectious bronchitis virus | | Gammacoronavirus | Avian coronavirus | |Gammalipothrixvirus| Acidianus (AFV1) | | Gemycircularvirus | Sclerotinia gemycircularvirus 1 | | Globulovirus | Pyrobaculum (PSV) | | Guttavirus | Aeropyrum pernix (APOV) | | Hantavirus | Nova virus | | Hantavirus | prospect Hill | | Hantavirus | Prospect Hill virus | | Hantavirus | Puumala virus | | Hantavirus | Sangassou virus | | Hantavirus | Seewis virus | | Hantavirus | Seoul virus | | Hantavirus | Sin Nombre Virus | | Hantavirus | Thailand virus | | Hantavirus | Thottapalayam virus | | Hantavirus | Tula virus | | Hantavirus | Andes virus | | Hantavirus | Anjozorobe virus | | Hantavirus | Dobrava virus | | Hantavirus | Hantaan virus | | Henipavirus | Cedar virus | | Henipavirus | Nipah virus | | Henipavirus | Hendra virus | | Hepacivirus | Hepacivirus A à N | | Hepadnavirus | Hepatitis B virus | | Hepadnavirus | Ground squirrel hepatitis virus | | Hepadnavirus | Woodchuck hepatitis virus | | Hepatovirus | Hepatovirus A | | Hepevirus | Hepatitis E virus | | Herpesvirus | Human Hespesvirus 1 à 8 | | Herpesvirus | Oyster Herpesvirus OsHV-1 | | Horsepox | virus | | Hunnivirus | Hunnivirus A | | Ilarvirus | Tobacco streak virus | | Influenzavirus A | Influenza A virus | | Influenzavirus B | Influenza B virus | | Influenzavirus C | Influenza C virus | | Influenzavirus D | Influenza D virus | | Inovirus | Escherichia virus M13 | | Ipomovirus | Cassava brown streak virus | | Ipomovirus | Cassava brown streak virus | | Ipomovirus | Ugandan cassava brown streak virus | | Ippy | virus | | Isavirus | Infectious salmon anemia virus | | JS98virus | Escherichia virus JS98 | | K1Gvirus | Escherichia virus K1G | | Kobuvirus | Aichivirus A à C | | Kppvirus | Pseudomonas virus KPP10, PAKP3, PAKP5, CHAP1 | | Kunsagivirus | Kunsagivirus A | | Lagovirus | Rabbit hemorrhagic disease virus | | Lambdavirus | Escherichia virus Lambda, HK022, HK97 | | Lentivirus | Caprine arthritis encephalitis virus | | Lentivirus | Visna-maedi virus | | Lentivirus | Human immunodeficiency virus -1 and -2 | | Lentivirus | Simian immunodeficiency virus | | Leporipoxvirus | Myxoma virus | | Leshmaniavirus | Leshmania RNA virus 1-1 | | Levivirus | Escherichia virus MS2 | | Limnipivirus | Limnipivirus A à C | | Luteovirus | Barley yellow dwarf virus | | Luz24virus | Pseudomonas virus LUZ24 | | Lyssavirus | Rabies virus | | Lyssavirus | Lagos bat virus | | Lyssavirus | Mokola virus | | Lyssavirus | Duvenhage virus | | Lyssavirus | European bat lyssavirus 1 | | Lyssavirus | European bat lyssavirus 2 | | Lyssavirus | Australian bat lyssavirus | | Lyssavirus | Aravan virus | | Lyssavirus | Khujand virus | | Lyssavirus | Irkut virus | | Lyssavirus | West Caucasian bat virus | | Lyssavirus | Shimoni bat virus | | Lyssavirus | Bokeloh bat lyssavirus | | Lyssavirus | Ikoma virus | | Mamastrovirus | Human astrovirus | | Marburgvirus | Lake victoria marburgvirus | | Marseillevirus | Marseillevirus marseillevirus | | Mastadenovirus | Human Adenovirus C | | Mastadenovirus | Canine Adenovirus | | Mastrevirus | Maize streak virus | | Mastrevirus | Wheat dwarf virus | | Mastrevirus | Maize streak virus | | Mastrevirus | Chickpea chlorotic dwarf virus | | Metapneumovirus | Avian metapneumovirus | | Metapneumovirus | Human metapneumovirus | | Microvirus | Enterobacteria phage phiX174 | | Mimivirus | Megavirus chilensis | | Mimivirus | Moumouvirus | | Mimivirus | Acanthamoeba polyphaga mimivirus | | Mobala | virus | | Mollivirus | Mollivirus sibericum | | Molluscipox | virus | | Morbillivirus | Canine Distemper virus | | Morbillivirus | Peste des Petits Ruminants | | Morbillivirus | Measles virus | | Muvirus | Escherichia virus Mu | | Mycoflexivirus | Botrytis virus F | | Nairovirus | dugbe virus | | Nairovirus | Hazara virus | | Nairovirus | kupe virus | | Nairovirus | Nairobi sheep disease virus | | Nairovirus | Crimean-Congo hemorrhagic fever nairovirus | | Nanovirus | Faba bean necrotic yellows virus | | Nanovirus | Faba bean necrotic stunt virus | | Narnavirus | Saccharomyces 20S RNA narnavirus | | Nepovirus | Grapevine fanleaf virus | | Nepovirus | Tobacco ringspot virus | | Norovirus | Norwalk virus | | Norovirus | Secovirus | | Novirhabdovirus | Infectious hematopoietic necrosis virus | | Orbivirus | African Horse sickness | | Orbivirus | Epizootic hemorragic disease of deer | | Orbivirus | Bluetongue virus | | Orthobunyavirus | La Crosse virus | | Orthobunyavirus | Schmallenberg virus | | Orthobunyavirus | Bnyamwera virus | | Orthopoxvirus | Camelpox | | Orthopoxvirus | Canarypox | | Orthopoxvirus | Cowpox | | Orthopoxvirus | Monkeypox | | Orthopoxvirus | Vaccinia virus | | Orthoreovirus | Mammalian orthoretrovirus | | P1virus | Escherichia virus P1 | | P2 virus | Escherichia virus P2, 186 | | P22 | Salmonella virus P22 | | Paknuvavirus | Pseudomonas virus PAKP1, PAKP2, PAKP4 | | Pandoravirus | Pandoravirus salinus | | Parapoxvirus | Orf virus | | Parapoxvirus | pseudocowpox virus | | Parapoxvirus | Bovine papular stomatitis virus | | Parechovirus | Parechovirus A & B | | Parvovirus | Minute virus of mice | | Parvovirus | Human parvovirus B19 | | Parvovirus | Adeno-associated virus-2 | | Pasivirus | Pasivirus | | Pbunavirus | Pseudomonas virus PB1 | | Pegivirus | Pegivirus A à K | | Pegivirus | Pegivirus A-B | | Pestivirus | Bovine viral diarrhea virus 1 & 2 | | Pestivirus | Border disease virus | | Pestivirus | Classical swine fever virus | | Pestivirus | Bovine viral diarrhea virus | | Phi29virus | Bacillus virus phi29 | | Phietavirus |Staphylococcus virus phiETA, phiNM2, phiNM4, phiNM85, CNPH82, 82alpha, 80| | Phikmvvirus | Pseudomonas virus phiKMV | | Phikzvvirus | Pseudomonas virus phiKZ | | Phlebovirus | Rift Valley fever virus | | Phlebovirus | Toscana virus | | Phlebovirus | Sandfly fever Naples virus | | Picobirnavirus | Human picobirnavirus | | Pichinde | virus | | Pithovirus | Pithovirus sibericum | | Pneumovirus | Bovine respiratory syncitial virus | | Pneumovirus | Human respiratory syncitial virus | | Polerovirus | Beet mild yellowing virus | | Polerovirus | Cereal yellow dwarf virus | | Polerovirus | Cucurbit aphid-borne yellows virus | | Polerovirus | Maize yellow dwarf virus | | Polerovirus | Oilseed rape mosaic virus | | Polerovirus | Potato leafroll virus | | Polerovirus | Turnip yellows virus | | Polerovirus | Wheat yellow dwarf virus | | Potexvirus | Pepino mosaic virus | | Potexvirus | Potato virus X | | Potyvirus | Lettuce mosaic virus | | Potyvirus | Plum pox virus | | Potyvirus | Potato virus Y | | Potyvirus | Turnip mosaic virus | | Quaranjavirus | Johnston Atoll virus | | Quaranjavirus | Qaranfil virus | | Quaranjavirus | Lake Chad virus | | Rabbit | virus | | Rb49virus | Escherichia virus RB49 | | Rb69virus | Escherichia virus RB69 | | Recovirus | Tulane virus | | Respirovirus | Human Parainfluenza virus 1 | | Respirovirus | Human Parainfluenza virus 3 | | Respirovirus | Swine Parainfluenza virus 1 | | Respirovirus | Swine Parainfluenza virus 3 | | Respirovirus | Bovine Parainfluenza virus 3 | | Respirovirus | Saendai virus | | Rosavirus | Rosavirus A | | Roseolovirus | Human betaherpesvirus 6A | | Roseolovirus | Human betaherpesvirus 7 | | Rotavirus | Rotavirus A | | Rubulavirus | Mumps virus | | Rubulavirus | Human Parainfluenza virus 2 | | Rubulavirus | Human Parainfluenza virus 4 | | Rubulavirus | Simian virus 5 | | Rubulavirus | Porcine rubulavirus PorPV | | Rubulavirus | Simian virus 41 | | Rudivirus |Sulfolobus islandicus (SIRV1, SIRV2), Acidianus (ARV1), Stygiolobus (SRV)| | Sadwavirus | Strawberry latent ringspot virus | | Sakobuvirus | Sakobuvirus A | | Salivirus | Salivirus A | | Sapelovirus | Sapelovirus A-B Avian sapelovirus | | Sapovirus | Sapporo virus | | Senecavirus | Senecavirus A | | Simplexvirus | Human alphaherpesvirus 1-2 | | Sp6virus | Salmonella virus SP6 | | Spiravirus | Aerospurum (ACV) | | Spo1virus | Bacillus virus SPO1 | | Spumavirus | Simian foamy virus | | T1virus | Escherichia virus T1 | | T4virus | Escherichia virus T4 | | T5virus | Escherichia virus T5 | | T7virus | Escherichia virus T7 | | Taterapox | virus | | Teschovirus | Teshchovirus A | | Thogotovirus | Thogoto virus | | Thogotovirus | Dhori virus | | Tobamovirus | Tobacco mosaic virus | | Tombusvirus | Tomato bushy stunt virus | | Torovirus | Equine torovirus | | Tospovirus | Tomato spotted wilt virus | | Totivirus | Saccharomyces cerevisiae virus L-A | | Tremovirus | Tremovirus A | | Trichovirus | Apple chlorotic leaf spot virus | | Turrivirus | Sulfolobus (STIV2) | | Twortvirus | Staphylococcus virus Twort | | Tymovirus | Turnip yelow mosaic virus | | Unclassified | Drosophila A virus | | V5 virus | Escherichia virus V5 | | Varicellovirus | Bovine alphaherpesvirus 1 | | Varicellovirus | Human alphaherpesvirus 3 | | Vesiculovirus | Vesicular stomatitis Indiana virus | | Viroids | Potato spindle tuber viroid | | Vitivirus | grapevine virus A | | Yatapox | virus |

|AUTRES GROUPES :
PROTISTES, CILIES| | |-----------------------------------------|------------| | Acanthamoeba |castellanii | | Babesia | bigemina | | Babesia | bovis | | Babesia | caballi | | Babesia | canis | | Babesia | divergens | | Babesia | gibsoni | | Babesia | microti | | Bonamia | sp. | | Dictyostelium | discoideum | | Leishmania |amazonensis | | Leishmania |braziliensis| | Leishmania | donovani | | Leishmania | guyanensis | | Leishmania | infantum | | Leishmania | major | | Marteilia | refringens | | Mesodinium | rubrum | | Myxomycetes | sp. | | Plasmodium | berghei | | Plasmodium | chabaudi | | Plasmodium | falciparum | | Plasmodium | knowlesi | | Plasmodium | malariae | | Plasmodium | ovale | | Plasmodium | petteri | | Plasmodium | vinckei | | Plasmodium | vivax | | Plasmodium | yoelii | | Tetrahymena |thermophila | | Toxoplasma | gondii | | Trypanosoma | cruzi | | Trypanosoma | brucei | | Trypanosoma | cruzi | | Trypanosoma | gambiense | | Trypanosoma | congolense | | Trypanosoma | equiperdum | | Trypanosoma | evansi | | Trypanosoma | gambiense | | Trypanosoma | lewisi | | Trypanosoma | rangeli | | Trypanosoma | theileri | | Trypanosoma | vivax | | Vermamoeba |vermiformis |

|PROCARYOTES BACTÉRIES| | |---------------------|-----------------------------------------------------------| | Bactéries | | | Acinetobacter | baumanii | | Agrobacterium | rhizogenes | | Agrobacterium | tumefaciens | | Aliivibrio | fischeri | | Alteromonas | infernus | | Alteromonas | macleodii | | Alteromonas | mediterranea | | Arsenophonus | sp. | | Bacillus | cereus | | Bacillus | subtilis | | Bacillus | thuringiensis | | Bacillus | amyloliquefaciens | | Bordetella | sp. | | Brevibacterium | linens | | Brochothrix | thermosphacta | | Burkholderia | cepacia | | Burkholderia | thailandensis | | Campylobacter | sp. | | Campylobacter | pylori | | Candidatus | Liberibacter solanacearum | | Candidatus |Liberibacter asiaticus/africanus/americanus (Huanglongbing)| | Candidatus | Phytoplasmes du groupe 16SrXII et 16SrV | | Carnobacterium | divergens | | Carnobacterium | maltaromaticum | | Carnobacterium | inhibens | | Chromobacterium | violaceum | | Chryseobacterium | sp. | | Citrobacter | sp. | | Clavibacter | michiganensis spp | | Clostridium | sp. | | Corynebacterium | glutamicum | | Deinococcus | aquaticus | | Deinococcus | geothermalis | | Deinococcus | gobiensis | | Deinococcus | humi | | Deinococcus | indicus | | Deinococcus | maricopensis | | Deinococcus | murrayi | | Deinococcus | polymerans | | Deinococcus | radiodurans | | Deinococcus | wulumuqiensis | | Deinococcus | yunweiensis | | Dickeya | dadantii | | Dickeya | solani | | Elisabethkingia | sp. | | Enterococcus | faecalis | | Enterococcus | faecium | | Erwinia | amylovora | | Escherichia | coli | | Fervidobacterium | sp. | | Flavobacterium | sp. | | Frankia | sp. | | Francisella | tularensis | | Francisella | philomeragia | | Geobacter | sulfurreducens | | Glutamicibacter | arilaitensis | | Haemophilus | influenzae | | Hafnia | alvei | | Helicobacter | pylori | | Klebsiella | pneumoniae | | Lactobacillus | acidophilus | | Lactobacillus | delbruckii | | Lactobacillus | bulgaricus | | Lactobacillus | rhamnosus | | Lactococcus | lactis | | Legionella | pneumophila | | Leptospira | interrogans | | Leucosnostoc | sp. | | Listeria | monocytogenes | | Macrococcus | sp. | | Micrococcus | sp. | | Moraxella | sp. | | Mycobacterium | bovis | | Mycobacterium | tuberculosis | | Mycobacterium | ulcerans | | Mycoplasma | genitalium | | Neisseria | meningitidis | | Pectobacterium | carotovorum | | Pectobacterium | atrosepticum | | Portiera | aleyrodidarum | | Propionobacterium | acnes | | Proteus | sp. | | Pseudomonas | aeruginosa | | Pseudomonas | fluorescens | | Pseudomonas | putida | | Psychrobacter | sp. | | Ralstonia | sp. | | Rhizobium | sp. | | Rickettsia | sp. | | Rickettsiella | sp. | | Saccharomyces | arboricola | | Saccharomyces | cariocanus | | Saccharomyces | cerevisiae | | Saccharomyces | eubayanus | | Saccharomyces | jurei | | Saccharomyces | kudriavzevii | | Saccharomyces | mikatae | | Saccharomyces | paradoxus | | Saccharomyces | pastorianus | | Saccharomyces | uvarum | | Salmonella | sp. | | Serratia | marcescens | | Shigella | dysenteriae | | Shigella | flexneri | | Staphylococcus | sp. | | Streptococcus | sp. | | Streptomyces | sp. | | Synechocystis | sp. | | Thermotoga | sp. | | Vagococcus | fluvialis | | Vagococcus | penaei | | Vibrio | alginolyticus | | Vibrio | aestuarianus | | Vibrio | aesturianus | | Vibrio | carchariae | | Vibrio | cholerae | | Vibrio | diabolicus | | Vibrio | fisheri | | Vibrio | fluvialis | | Vibrio | parahaemolyticus | | Vibrio | splendidus | | Vibrio | vulnificus | | Wolbachia | sp. | | Xanthomonas | sp. | | Xylella | fastidiosa | | Yersinia | aldovae | | Yersinia | aleksiciae | | Yersinia | bercovieri | | Yersinia | enterolitica | | Yersinia | entomophaga | | Yersinia | frederiksenii | | Yersinia | intermedia | | Yersinia | kristensenii | | Yersinia | massiliensis | | Yersinia | mollaretii | | Yersinia | nurmii | | Yersinia | pekkanenii | | Yersinia | pestis | | Yersinia | pseudotuberculosis | | Yersinia | rohdei | | Yersinia | ruckeri | | Yersinia | similis | | Yersinia | wautersii |

|PROCARYOTES
CYANOBACTÉRIES| | |---------------------------------|------------| | Anabaena | sp. | | Anabaena | flos-aquae | | Aphanizomenon | sp | | Arthrospira | sp | | Calothrix | sp | | Chameasiphon | sp | | Chlorogloeopsis | sp | | Chloococcidiopsis | sp | | Crinalium | sp | | Cyanobium | sp | | Cyanothece | sp | | Cylindrospermum | sp | | Fischerella | sp | | Geitlerinema | sp | | Geminocystis | sp | | Gloeobacter | sp | | Gloeocapsa | sp | | Gloeothece | sp | | Halothece | sp | | Kamptonema | sp. | | Leptolyngbya | sp. | | Michrocaete | sp. | | Microcystis | aeruginosa | | Nostoc | sp. | | Oscillatoria | sp. | | Planktothrix | sp. | | Pleurocapsa | sp. | | Prochrorococcus | marinus | | Prochlorothrix | sp. | | Rivularia | sp. | | Synechococcus | elongatus | | Synechococcus |leopoliensis| | Synechocystis | sp. | | Tolypothrix | sp. | | Trichodesmium | erythraeum |

|PROCARYOTES ARCHEES| | |-------------------|---| | Acidianus |sp.| | Aeropyrum |sp.| | Pyrobaculum |sp.| | Pyrococcus |sp.| | Sulfolobus |sp.| | Thermococus |sp.|

| PHYTOPLANCTON | | |----------------|--------------| | Alexandrium | sp | | Amphidoma | sp. | |Auxenochlorella |protothecoides| | Azadinium | sp. | | Chlamydomonas | reinhardtii | | Chlorella | sorokiniana | | Cochlodinium |polykrikoides | | Dinophysis | sp. | | Dinophysis | sp. | | Emiliania | huxleyi | | Gambierdiscus | sp. | | Hemiselmis | sp. | | Heterocapsa | triquetra | | Heterosigma | akashiwo | | Isochrysis | galbana | | Karenia | sp. | | Karlodinium | sp. | | Lingulodinium | polyedrum | | Mesodinium | rubrum | | Ostreococcus | tauri | | Ostreopsis | ovata | | Phaeodactylum | tricornutum | | Polytomella | sp. | | Prorocentrum | sp. | | Proteomonas | sp. | | Protoceratium | reticulatum | |Pseudo-nitzschia| sp. | | Rhinomonas | sp. | | Rhodomonas | sp. | | Scripsiella | trochoïdea | | Teleaulax | sp. | | Thalassiosira | pseudonana | | Tisochrysis | lutea | | Vulcanodinium | rugosum |

| PLANTES | | |-------------------|--------------| | Alnus | glutinosa | | Acacia | mangium | | Amborella | trichopoda | | Ambrosia |artemisiifolia| | Ambrosia | maritima | | Ambrosia | psilostachya | | Ambrosia | tenuifolia | | Ambrosia | trifida | | Arabidopsis | thaliana | | Beta | vulgaris | | Betula | pendula | | Brachypodium | distachyon | | Brassica | napus | | Brassica | rappa | | Citrus | sp. | | Coffea | canephora | | Coffea | arabica | | Daucus | carota | | Desmodus | subsp.icatus | | Elaeis | guineensis | | Erythranthe | guttata | | Eucalyptus | grandis | | Ficus | sp. | | Fragaria | vesca | | Gossypum | arboreum | | Gycine | max | | Helianthus | anuus | | Hevea | brasiliensis | | Hordeum | sp. | | Lemna | gibba | | Linum |usitatissimum | | Lotus | japonicus | | Malus | sp. | | Marchantia | polymorpha | | Medicago | truncatula | | Mimulus | guttatus | | Musa | sp. | | Nicotiana | tabacum | | Oryza | sp. | | Physcomitrella | patens | | Pinus | sp. | | Pisum | sativum | | Populus | trichocarpa | | Prunus | sp. | |Pseudokirchneriella| subapicata | | Quercus | sp. | | Raphidocelis | subcapitata | | Saccharum | sp. | | Salix | sp. | | Secale | sp. | | Selaginella |moellendorffii| | Senecio | sp. | | Setaria | viridis | | Silene | sp. | | Solanum | lycopersicum | | Solanum | melongena | | Theobroma | cacao | | Triticum | aestivum | | Triticum | durum | | Vanilla | planifolia | | Vitis | sp. | | Zea | mays |

| FUNGI | | |-------------------|--------------------| | Agaricus | bisporus | | Aphanomyces | astaci | | Aspergillus | brasiliensis | | Aspergillus | flavus | | Aspergillus | fumigatus | | Aspergillus | nidulans | | Aspergillus | niger | | Boletus | edulis | | Botrytis | cinerea | | Candida | albicans | | Candida | glabrata | | Candida | krusei | | Candida | tropicalis | | Claviceps | purpurea | | Clavisp.ora | lusitaniae | | Colletotrichum | gloeosporioides | | Colletotrichum | musae | | Coprinopsis | cinerea | | Coprinus | cinereus | | Cryptococcus | neoformans | | Debaryomyces | hansenii | | Eremothecium | gossypii | | Eurotium | rubrum | | Fomitopsis | pinicola | | Fusarium | culmorum | | Fusarium | graminearum | | Fusarium | verticillioides | | Geotrichum | candidum | | Heterobasidion | annosum | | Kluyveromyces | lactis | | Kluyveromyces | marxianus | | Laccaria | sp. | | Lentinula | edodes | | Lipomyces | starkeyi | | Malassezia | furfur | | Melampsora | larici-populina | | Mucor | circinelloides | | Mycosphaerella | musicola | | Mycosphaerella | fijiensis | | Neurospora | crassa | | Ogataea | polymorpha | | Penicillium | chrysogenum | | Penicillium | expansum | | enicillium | verrucosum | | Penicillium | roqueforti | | Penicillium | camemberti | | Phycomyces | blakesleeanus | | Phanerochaete | chrysosporium | | Podospora | anserina | | Puccinia |graminis fsp tritici| | Pycnoporus | cinnabarinus | | Rhizopus | arrhizus | | Rhodotorula | mucilaginosa | | Saccharomyces | cerevisiae | | Saccharomyces | uvarum | | Saccharomyces | carlsbergensis | | Scedosporium | apiospermum | | Scheffersomyces | stipitis | | Schizophyllum | commune | |Schizosaccharomyces| pombe | | Serpula | lacrymans | | Torulaspora | delbrueckii | | Trametes | versicolor | | Trichoderma | reesei | | Trichoderma | viride | | Trichoderma | atroviride | | Ustilago | maydis | | Venturia | inaequalis | | Yarrowia | lipolytica | | Zygosaccharomyces | rouxii |

|ANIMAUX INVERTÉBRÉS| | |-------------------|-----------------| | Achantocheilonema | viteae | | Acizia | uncatoides | | Acyrthosiphon | pisum | | Adalia | bipunctata | | Aedes | aegypti | | Aedes | albopictus | | Aleurodicus | dispersus | | Anopheles | albimanus | | Anopheles | aquasalis | | Anopheles | arabiensis | | Anopheles | darlingi | | Anopheles | funestus | | Anopheles | gambiae | | Anopheles | sinensis | | Anopheles | stephensi | | Aphis | gossypii | | Apis | mellifera | | Aplysia | californica | | Arbacia | punctulata | | Armadillidium | nasatum | | Asellus | sp. | | Asobara | tabida | | Astacus | sp. | | Austropotamobius | sp. | | Batrocera | sp, | | Bemisia | tabaci | | Brachionus | calyciflorus | | Brugia | sp. | | Bursaphelenchus | xylophilus | | Busseola | fusca | | Busseola | phaia | | Busseola | segeta | | Caenorhabditis | elegans | | Callosobruchus | maculatus | | Cantareus | aspersus | | Ceratitis | sp. | | Cerodaphnia | dubia | | Chilo | partellus | | Chilo | sacchariphagus | | Chironomus | riparius | | Chorthippus | parallelus | | Cibdela | janthina | | Cicadulina | sp. | | Ciona | intestinalis | | Coelopidae | sp. | | Crassostrea | sp. | | Culex | pipens | | Culex |quinquefasciatus | | Dacus | sp. | | Daphnia | magna | | Daphnia | sp. | | Diopsidae | sp. | | Dirofilaria | immitis | | Dirofilaria | repens | | Ditylenchus | dipsaci | | Drosophila | suzukii | | Drosophila | melanogaster | | Echinococcus | multilocularis | | Eisenia | fetida | | Encarsia | sp. | | Eretmocerus | sp. | | Euprymna | scolopes | | Folsomia | candida | | Fopius | arisanus | | Galleria | sp. | | Globodera | pallida | | Globodera | rostochiensis | | Glycaspis | brimblecombei | | Gryllus | bimaculatus | | Harmonia | axyridis | | Heliconius | sp. | | Helicoverpa | armigera | | Helix | pomatia | | Hermetia | illucens | | Heterodera | schachtii | | Hydra | attenuata | | Hydra | sp. | | Limulus | polyphemus | | Litomosoides | sigmodontis | | Loa | loa | | Locusta | migratoria | | Loligo | pealei | | Lymnaea | stagnalis | | Macrostomum | lignano | | Mansonella | ozzardi | | Mansonella | perstans | | Mansonella | streptocerca | | Melanaphis | sp. | | Meloidogyne | incognita | | Mnemiopsis | leidyi | | Mytilus | edulis | | Mytilus |galloprovincialis| | Nasonia | vtripennis | | Navicula | pelliculosa | | Neoceratitis | sp. | | Nesidiocoris | sp. | | Nucella | lapillus | | Onchocerca | sp. | | Orconectes | sp. | | Ostrea | sp. | | Ostrinia | nubilalis | | Pacifastacus | sp. | | Paracoccus | marginatus | | Paysandisia | archon | | Perigrinus | maïdis | | Physa | acuta | | Platynereis | dumerilii | | Pocillopora | sp. | | Porcellio | dilatatus | | Porcellionides | pruinosus | | Pristionchus | pacificus | | Procambarus | clarkii | | Psyttalia | fletcheri | | Radopholus | similis | | Rhodnius | prolixus | | Rhodnius | robustus | | Scathophaga | stercoraria | | Schistocerca | gregaria | | Sesamia | calamistis | | Sesamia | nonagrioides | | Spodoptera | frugiperda | | Spodoptera | littoralis | | Spodoptera | exigua | |Strongylocentrotus | purpuratus | | Tapes | philippinarum | | Tenebrio | molitor | | Tetranychus | urticae | | Thaumetopoea | pityocampa | | Thaumetopoea | spp | | Thysanoptera | sp. | | Trialeurodes | vaporariorum | | Triatoma | brasiliensis | | Tribolium | castaneum | | Trichogramma | sp. | | Tubifex | tubifex | | Tuta | absoluta | | Varroa destructor | sp. | | Vespa | velutina | | Wuchereria | bancrofti | | Xylocopinae | sp. | | Zaprionus | indianus | | Zeugodacus | sp. |

|ANIMAUX VERTÉBRÉS| | |-----------------|-----------------| | Acipenser | baerii | | Anas | platyrhynchos | | Anolis | carolinensis | | Anser |anser domesticus | | Apodemus | flavicollis | | Apodemus | sylvaticus | | Ardeotis | kori | | Argyrosomus | regius | | Arvicola | sherman | | Arvicola | terrestris | | Bombina | variegata | | Bos | taurus | | Brachydanio | rerio | | Cairina | moschata | | Callithrix | jacchus | | Canis | lupus | | Canis |lupus familiaris | | Capra | hircus | | Cavia | porcellus | | Cervus | sp. | | Columba | domestica | | Columba | livia | | Coturnix | coturnix | | Coturnix | japonica | | Cyanistes | caeruleus | | Cyprinus | carpio | | Dicentrarchus | labrax | | Equus | asinus | | Equus | caballus | | Felis |sylvestris catus | | Gallus | gallus | | Gasterosteus | aculeatus | | Lama | glama | | Marmota | marmota | | Meleagris | gallopavo | | Meriones | unguiculatus | | Mesocricetus | auratus | | Microtus | agrestis | | Microtus | arvalis | | Mus | musculus | | Mustela | putorius furo | | Myodes | glareolus | | Nothobranchius | furzeri | | Numida | meleagris | | Oncorhynchus | mykiss | | Oreochromis | aureus | | Oryctolagus | cuniculus | | Oryzias | melastigma | | Ovis | aries | | Parus | major | | Passer | domesticus | | Pelophylax | kl esculentus | | Rattus | norvegicus | | Rattus | rattus | | Salmo | Salar | | Salmo | trutta | | Scophthalmus | maximus | | Scyliorhinus | canicula | | Serinus | canaria | | Solea | solea | | Sorex | araneus | | Sorex | coronatus | | Sparus | aurata | | Spondyliosoma | cantharus | | Sus |domesticus scrofa| | Vulpes | vulpes | | Xenopus | laevis | | Zootoca | vivipara |


Historique des versions

Version 1

ANNEXE

LISTE DES ESPÈCES MODÈLE POUR LA RECHERCHE

Consultable à l'adresse électronique http://www.enseignementsup-recherche.gouv.fr/, rubrique " recherche ", sous-rubrique " encadrement des pratiques de recherche " ou par simple demande auprès des services du ministre chargé de la recherche. Cette liste peut être révisée en fonction de l'évolution des pratiques de la recherche.

Genre

Espèces Modèles

VIRUS

Alfamovirus

Alfalfa mosaic virus

Alfatorquevirus

Torque Teno Virus (TTV)

Alfatorquevirus

Torque Teno Midi Virus (TTMDV)

Alfatorquevirus

Torque Teno Mini Virus (TTMV)

Alphabaculovirus

Autographa california multiple nucleopolyhedrovirus

Alphabicaudavirus

Acidianus (ATV)

Alphacoronavirus

Alphacoronavirus 1

Alphacoronavirus

Human coronavirus 229E

Alphacoronavirus

Human coronavirus NL63

Alphacoronavirus

Porcine Respiratory Corona Virus

Alphacoronavirus

Feline Infectious Peritonitis virus

Alphacoronavirus

Porcine epidemic diarrhea virus (PEDV)

Alphanodavirus

Flock House virus

Alphapapillomavirus

Human papillomavirus

Alpharetrovirus

Avian leukosis virus

Alphatristromavirus

Pyrobaculum (PSV1)

Alphavirus

Ross River virus

Alphavirus

Salmon pancreas disease virus

Alphavirus

Bebaru Virus

Alphavirus

Everglades Virus

Alphavirus

Mayaro virus

Alphavirus

Mucambo virus

Alphavirus

Ndumu virus

Alphavirus

Tonate virus

Alphavirus

Chikungunya virus

Alphavirus

Eastern equine encephalitis virus

Alphavirus

O'nyong-nyong virus

Alphavirus

Semliki Forest virus

Alphavirus

Sindbis virus

Alphavirus

Venezuelan equine encephalitis virus

Alphavirus

Western equine encephalitis virus

Alphavirus

Rubella virus

Ampelovirus

Little cherry virus 2

Ampullavirus

Acidianus (ABV)

Aparavirus

Acute bee paralysis virus

Aphthovirus

Foot-and-mouth disease virus

Aquabirnavirus

Infectious Pancreatic Necrosis virus

Aquamavirus

Aquamavirus A

Arenavirus

Lymphocytic choriomeningitis virus

Arenavirus

Guanarito virus

Arenavirus

Junin virus

Arenavirus

Lassa virus

Arenavirus

Lujo virus

Arenavirus

Machupo virus

Arenavirus

Mopeia virus

Arterivirus

Equine arteritis virus

Asfarivirus

African swine fever virus

Avastrovirus

Turkey astrovirus

Avibirnavirus

Infectious Bursal disease virus

Avihepadnavirus

Duck hepatitis B virus

Avihepatovirus

Avihepatovirus A

Avipoxvirus

Fowlpox virus

Avulavirus

Newcastle disease virus

Babuvirus

Banana bunchy top virus

Badnavirus

Banana streak virus

Badnavirus

Cacao swollen shoot virus

Begomovirus

African cassava mosaic virus

Begomovirus

Tomato yellow leaf virus

Begomovirus

Tomato yellow leaf curl virus

Begomovirus

Pepper yellow vein Mali virus

Begomovirus

African cassava mosaic virus

Begomovirus

East African cassava Kenya virus

Begomovirus

South African cassava mosaic virus

Benyvirus

Beet necrotic yellow vein virus

Benyvirus

Beet soil-borne mosaic virus

Betacoronavirus A

Murine coronavirus

Betacoronavirus A

Human coronavirus HKU1

Betacoronavirus A

Human coronavirus OC43

Betacoronavirus A

Bovine Coronavirus

Betacoronavirus B

SARS coronavirus

Betacoronavirus B

SARS related Rh bat CoV HKU3

Betacoronavirus B

SARS related Rh civet coronavirus

Betacoronavirus C

MERS coronavirus

Betacoronavirus C

NeoCoV

Betalipiothrixvirus

Acidianivirus (AFV3, AFV6, AFV7, AFV8)

Betaretrovirus

Mouse Mammary tumor virus

Bocaparvovirus

Human bocavirus

Bornavirus

Borna disease virus

Bromovirus

Brome mosaic virus

Capillovirus

Cherry virus A

Capripoxvirus

Sheeppox virus

Capulavirus

Alfalfa leaf curl virus

Cardiovirus

Cardiovirus A-C

Caulimovirus

Banana streak virus

Caulimovirus

Cauliflower mosaic virus

Circovirus

Porcine circovirus 1 & 2

Clavavirus

Aeropyrum pernix (PBV1)

Closterovirus

Citrus tristeza virus

Comovirus

Cowpea mosaic virus

Cosavirus

Cosavirus A

Cripavirus

Drosophila C virus

Cripavirus

Cricket paralysis virus

Cucumovirus

Cucumber mosaic virus

Cytomegalovirus

Human betaherpesvirus 5

Deltalipothrixvirus

Acidianus (AFV2)

Deltapolyomavirus

Human polyomavirus 6

Deltaretrovirus

Bovine Leukemia virus

Deltaretrovirus

Human T cell leukemia virus

Deltavirus

Hepatitis Delta virus

Dicipivirus

Cadicivirus A

Ebolavirus

Ectromelia

virus

Enterovirus

Enterovirus A à J

Enterovirus

Rhinovirus A à C

Entomobirnavirus

Drosophila X virus

Ephemerovirus

Bovine fever ephemerovirus

Erbovirus

Erbovirus A

Erythrovirus

Human parvovirus B19

Fabavirus

Arabis mosaic virus

Felix01virus

Salmonlla virus Felix01, Escherichia viruswV8

Flavivirus

Alkhurma virus

Flavivirus

Muray valley encephalitis virus

Flavivirus

Carey Island virus

Flavivirus

Dakar bat virus

Flavivirus

Dengue virus

Flavivirus

Hypr virus

Flavivirus

Ilheus virus

Flavivirus

Japanese encephalitis virus

Flavivirus

Kyasanur forest disease virus

Flavivirus

Louping ill virus

Flavivirus

Omsk hemorrhagic fever virus

Flavivirus

Powassan virus

Flavivirus

Rio Bravo virus

Flavivirus

Rocio

Flavivirus

St. Louis encephalitis virus

Flavivirus

Tick-borne encephalitis virus

Flavivirus

Verno-estivale russe encephalitis

Flavivirus

Wesselsbron virus

Flavivirus

West Nile virus

Flavivirus

Yellow fever virus

Flavivirus

Zika virus

Foveavirus

Apricot latent virus

Furovirus

Beet necrotic yellow vein virus

Fusellovirus

Sulfolobus (SSV5, SSV6), Aeropyrum (APSV1), Acidianus (ASV1)

Gallivirus

Gallivirus A

Gamma retrovirus

Murine leukemia virus

Gammacoronavirus

Avian infectious bronchitis virus

Gammacoronavirus

Avian coronavirus

Gammalipothrixvirus

Acidianus (AFV1)

Gemycircularvirus

Sclerotinia gemycircularvirus 1

Globulovirus

Pyrobaculum (PSV)

Guttavirus

Aeropyrum pernix (APOV)

Hantavirus

Nova virus

Hantavirus

prospect Hill

Hantavirus

Prospect Hill virus

Hantavirus

Puumala virus

Hantavirus

Sangassou virus

Hantavirus

Seewis virus

Hantavirus

Seoul virus

Hantavirus

Sin Nombre Virus

Hantavirus

Thailand virus

Hantavirus

Thottapalayam virus

Hantavirus

Tula virus

Hantavirus

Andes virus

Hantavirus

Anjozorobe virus

Hantavirus

Dobrava virus

Hantavirus

Hantaan virus

Henipavirus

Cedar virus

Henipavirus

Nipah virus

Henipavirus

Hendra virus

Hepacivirus

Hepacivirus A à N

Hepadnavirus

Hepatitis B virus

Hepadnavirus

Ground squirrel hepatitis virus

Hepadnavirus

Woodchuck hepatitis virus

Hepatovirus

Hepatovirus A

Hepevirus

Hepatitis E virus

Herpesvirus

Human Hespesvirus 1 à 8

Herpesvirus

Oyster Herpesvirus OsHV-1

Horsepox

virus

Hunnivirus

Hunnivirus A

Ilarvirus

Tobacco streak virus

Influenzavirus A

Influenza A virus

Influenzavirus B

Influenza B virus

Influenzavirus C

Influenza C virus

Influenzavirus D

Influenza D virus

Inovirus

Escherichia virus M13

Ipomovirus

Cassava brown streak virus

Ipomovirus

Cassava brown streak virus

Ipomovirus

Ugandan cassava brown streak virus

Ippy

virus

Isavirus

Infectious salmon anemia virus

JS98virus

Escherichia virus JS98

K1Gvirus

Escherichia virus K1G

Kobuvirus

Aichivirus A à C

Kppvirus

Pseudomonas virus KPP10, PAKP3, PAKP5, CHAP1

Kunsagivirus

Kunsagivirus A

Lagovirus

Rabbit hemorrhagic disease virus

Lambdavirus

Escherichia virus Lambda, HK022, HK97

Lentivirus

Caprine arthritis encephalitis virus

Lentivirus

Visna-maedi virus

Lentivirus

Human immunodeficiency virus -1 and -2

Lentivirus

Simian immunodeficiency virus

Leporipoxvirus

Myxoma virus

Leshmaniavirus

Leshmania RNA virus 1-1

Levivirus

Escherichia virus MS2

Limnipivirus

Limnipivirus A à C

Luteovirus

Barley yellow dwarf virus

Luz24virus

Pseudomonas virus LUZ24

Lyssavirus

Rabies virus

Lyssavirus

Lagos bat virus

Lyssavirus

Mokola virus

Lyssavirus

Duvenhage virus

Lyssavirus

European bat lyssavirus 1

Lyssavirus

European bat lyssavirus 2

Lyssavirus

Australian bat lyssavirus

Lyssavirus

Aravan virus

Lyssavirus

Khujand virus

Lyssavirus

Irkut virus

Lyssavirus

West Caucasian bat virus

Lyssavirus

Shimoni bat virus

Lyssavirus

Bokeloh bat lyssavirus

Lyssavirus

Ikoma virus

Mamastrovirus

Human astrovirus

Marburgvirus

Lake victoria marburgvirus

Marseillevirus

Marseillevirus marseillevirus

Mastadenovirus

Human Adenovirus C

Mastadenovirus

Canine Adenovirus

Mastrevirus

Maize streak virus

Mastrevirus

Wheat dwarf virus

Mastrevirus

Maize streak virus

Mastrevirus

Chickpea chlorotic dwarf virus

Metapneumovirus

Avian metapneumovirus

Metapneumovirus

Human metapneumovirus

Microvirus

Enterobacteria phage phiX174

Mimivirus

Megavirus chilensis

Mimivirus

Moumouvirus

Mimivirus

Acanthamoeba polyphaga mimivirus

Mobala

virus

Mollivirus

Mollivirus sibericum

Molluscipox

virus

Morbillivirus

Canine Distemper virus

Morbillivirus

Peste des Petits Ruminants

Morbillivirus

Measles virus

Muvirus

Escherichia virus Mu

Mycoflexivirus

Botrytis virus F

Nairovirus

dugbe virus

Nairovirus

Hazara virus

Nairovirus

kupe virus

Nairovirus

Nairobi sheep disease virus

Nairovirus

Crimean-Congo hemorrhagic fever nairovirus

Nanovirus

Faba bean necrotic yellows virus

Nanovirus

Faba bean necrotic stunt virus

Narnavirus

Saccharomyces 20S RNA narnavirus

Nepovirus

Grapevine fanleaf virus

Nepovirus

Tobacco ringspot virus

Norovirus

Norwalk virus

Norovirus

Secovirus

Novirhabdovirus

Infectious hematopoietic necrosis virus

Orbivirus

African Horse sickness

Orbivirus

Epizootic hemorragic disease of deer

Orbivirus

Bluetongue virus

Orthobunyavirus

La Crosse virus

Orthobunyavirus

Schmallenberg virus

Orthobunyavirus

Bnyamwera virus

Orthopoxvirus

Camelpox

Orthopoxvirus

Canarypox

Orthopoxvirus

Cowpox

Orthopoxvirus

Monkeypox

Orthopoxvirus

Vaccinia virus

Orthoreovirus

Mammalian orthoretrovirus

P1virus

Escherichia virus P1

P2 virus

Escherichia virus P2, 186

P22

Salmonella virus P22

Paknuvavirus

Pseudomonas virus PAKP1, PAKP2, PAKP4

Pandoravirus

Pandoravirus salinus

Parapoxvirus

Orf virus

Parapoxvirus

pseudocowpox virus

Parapoxvirus

Bovine papular stomatitis virus

Parechovirus

Parechovirus A & B

Parvovirus

Minute virus of mice

Parvovirus

Human parvovirus B19

Parvovirus

Adeno-associated virus-2

Pasivirus

Pasivirus

Pbunavirus

Pseudomonas virus PB1

Pegivirus

Pegivirus A à K

Pegivirus

Pegivirus A-B

Pestivirus

Bovine viral diarrhea virus 1 & 2

Pestivirus

Border disease virus

Pestivirus

Classical swine fever virus

Pestivirus

Bovine viral diarrhea virus

Phi29virus

Bacillus virus phi29

Phietavirus

Staphylococcus virus phiETA, phiNM2, phiNM4, phiNM85, CNPH82, 82alpha, 80

Phikmvvirus

Pseudomonas virus phiKMV

Phikzvvirus

Pseudomonas virus phiKZ

Phlebovirus

Rift Valley fever virus

Phlebovirus

Toscana virus

Phlebovirus

Sandfly fever Naples virus

Picobirnavirus

Human picobirnavirus

Pichinde

virus

Pithovirus

Pithovirus sibericum

Pneumovirus

Bovine respiratory syncitial virus

Pneumovirus

Human respiratory syncitial virus

Polerovirus

Beet mild yellowing virus

Polerovirus

Cereal yellow dwarf virus

Polerovirus

Cucurbit aphid-borne yellows virus

Polerovirus

Maize yellow dwarf virus

Polerovirus

Oilseed rape mosaic virus

Polerovirus

Potato leafroll virus

Polerovirus

Turnip yellows virus

Polerovirus

Wheat yellow dwarf virus

Potexvirus

Pepino mosaic virus

Potexvirus

Potato virus X

Potyvirus

Lettuce mosaic virus

Potyvirus

Plum pox virus

Potyvirus

Potato virus Y

Potyvirus

Turnip mosaic virus

Quaranjavirus

Johnston Atoll virus

Quaranjavirus

Qaranfil virus

Quaranjavirus

Lake Chad virus

Rabbit

virus

Rb49virus

Escherichia virus RB49

Rb69virus

Escherichia virus RB69

Recovirus

Tulane virus

Respirovirus

Human Parainfluenza virus 1

Respirovirus

Human Parainfluenza virus 3

Respirovirus

Swine Parainfluenza virus 1

Respirovirus

Swine Parainfluenza virus 3

Respirovirus

Bovine Parainfluenza virus 3

Respirovirus

Saendai virus

Rosavirus

Rosavirus A

Roseolovirus

Human betaherpesvirus 6A

Roseolovirus

Human betaherpesvirus 7

Rotavirus

Rotavirus A

Rubulavirus

Mumps virus

Rubulavirus

Human Parainfluenza virus 2

Rubulavirus

Human Parainfluenza virus 4

Rubulavirus

Simian virus 5

Rubulavirus

Porcine rubulavirus PorPV

Rubulavirus

Simian virus 41

Rudivirus

Sulfolobus islandicus (SIRV1, SIRV2), Acidianus (ARV1), Stygiolobus (SRV)

Sadwavirus

Strawberry latent ringspot virus

Sakobuvirus

Sakobuvirus A

Salivirus

Salivirus A

Sapelovirus

Sapelovirus A-B Avian sapelovirus

Sapovirus

Sapporo virus

Senecavirus

Senecavirus A

Simplexvirus

Human alphaherpesvirus 1-2

Sp6virus

Salmonella virus SP6

Spiravirus

Aerospurum (ACV)

Spo1virus

Bacillus virus SPO1

Spumavirus

Simian foamy virus

T1virus

Escherichia virus T1

T4virus

Escherichia virus T4

T5virus

Escherichia virus T5

T7virus

Escherichia virus T7

Taterapox

virus

Teschovirus

Teshchovirus A

Thogotovirus

Thogoto virus

Thogotovirus

Dhori virus

Tobamovirus

Tobacco mosaic virus

Tombusvirus

Tomato bushy stunt virus

Torovirus

Equine torovirus

Tospovirus

Tomato spotted wilt virus

Totivirus

Saccharomyces cerevisiae virus L-A

Tremovirus

Tremovirus A

Trichovirus

Apple chlorotic leaf spot virus

Turrivirus

Sulfolobus (STIV2)

Twortvirus

Staphylococcus virus Twort

Tymovirus

Turnip yelow mosaic virus

Unclassified

Drosophila A virus

V5 virus

Escherichia virus V5

Varicellovirus

Bovine alphaherpesvirus 1

Varicellovirus

Human alphaherpesvirus 3

Vesiculovirus

Vesicular stomatitis Indiana virus

Viroids

Potato spindle tuber viroid

Vitivirus

grapevine virus A

Yatapox

virus

AUTRES GROUPES :

PROTISTES, CILIES

Acanthamoeba

castellanii

Babesia

bigemina

Babesia

bovis

Babesia

caballi

Babesia

canis

Babesia

divergens

Babesia

gibsoni

Babesia

microti

Bonamia

sp.

Dictyostelium

discoideum

Leishmania

amazonensis

Leishmania

braziliensis

Leishmania

donovani

Leishmania

guyanensis

Leishmania

infantum

Leishmania

major

Marteilia

refringens

Mesodinium

rubrum

Myxomycetes

sp.

Plasmodium

berghei

Plasmodium

chabaudi

Plasmodium

falciparum

Plasmodium

knowlesi

Plasmodium

malariae

Plasmodium

ovale

Plasmodium

petteri

Plasmodium

vinckei

Plasmodium

vivax

Plasmodium

yoelii

Tetrahymena

thermophila

Toxoplasma

gondii

Trypanosoma

cruzi

Trypanosoma

brucei

Trypanosoma

cruzi

Trypanosoma

gambiense

Trypanosoma

congolense

Trypanosoma

equiperdum

Trypanosoma

evansi

Trypanosoma

gambiense

Trypanosoma

lewisi

Trypanosoma

rangeli

Trypanosoma

theileri

Trypanosoma

vivax

Vermamoeba

vermiformis

PROCARYOTES BACTÉRIES

Bactéries

Acinetobacter

baumanii

Agrobacterium

rhizogenes

Agrobacterium

tumefaciens

Aliivibrio

fischeri

Alteromonas

infernus

Alteromonas

macleodii

Alteromonas

mediterranea

Arsenophonus

sp.

Bacillus

cereus

Bacillus

subtilis

Bacillus

thuringiensis

Bacillus

amyloliquefaciens

Bordetella

sp.

Brevibacterium

linens

Brochothrix

thermosphacta

Burkholderia

cepacia

Burkholderia

thailandensis

Campylobacter

sp.

Campylobacter

pylori

Candidatus

Liberibacter solanacearum

Candidatus

Liberibacter asiaticus/africanus/americanus (Huanglongbing)

Candidatus

Phytoplasmes du groupe 16SrXII et 16SrV

Carnobacterium

divergens

Carnobacterium

maltaromaticum

Carnobacterium

inhibens

Chromobacterium

violaceum

Chryseobacterium

sp.

Citrobacter

sp.

Clavibacter

michiganensis spp

Clostridium

sp.

Corynebacterium

glutamicum

Deinococcus

aquaticus

Deinococcus

geothermalis

Deinococcus

gobiensis

Deinococcus

humi

Deinococcus

indicus

Deinococcus

maricopensis

Deinococcus

murrayi

Deinococcus

polymerans

Deinococcus

radiodurans

Deinococcus

wulumuqiensis

Deinococcus

yunweiensis

Dickeya

dadantii

Dickeya

solani

Elisabethkingia

sp.

Enterococcus

faecalis

Enterococcus

faecium

Erwinia

amylovora

Escherichia

coli

Fervidobacterium

sp.

Flavobacterium

sp.

Frankia

sp.

Francisella

tularensis

Francisella

philomeragia

Geobacter

sulfurreducens

Glutamicibacter

arilaitensis

Haemophilus

influenzae

Hafnia

alvei

Helicobacter

pylori

Klebsiella

pneumoniae

Lactobacillus

acidophilus

Lactobacillus

delbruckii

Lactobacillus

bulgaricus

Lactobacillus

rhamnosus

Lactococcus

lactis

Legionella

pneumophila

Leptospira

interrogans

Leucosnostoc

sp.

Listeria

monocytogenes

Macrococcus

sp.

Micrococcus

sp.

Moraxella

sp.

Mycobacterium

bovis

Mycobacterium

tuberculosis

Mycobacterium

ulcerans

Mycoplasma

genitalium

Neisseria

meningitidis

Pectobacterium

carotovorum

Pectobacterium

atrosepticum

Portiera

aleyrodidarum

Propionobacterium

acnes

Proteus

sp.

Pseudomonas

aeruginosa

Pseudomonas

fluorescens

Pseudomonas

putida

Psychrobacter

sp.

Ralstonia

sp.

Rhizobium

sp.

Rickettsia

sp.

Rickettsiella

sp.

Saccharomyces

arboricola

Saccharomyces

cariocanus

Saccharomyces

cerevisiae

Saccharomyces

eubayanus

Saccharomyces

jurei

Saccharomyces

kudriavzevii

Saccharomyces

mikatae

Saccharomyces

paradoxus

Saccharomyces

pastorianus

Saccharomyces

uvarum

Salmonella

sp.

Serratia

marcescens

Shigella

dysenteriae

Shigella

flexneri

Staphylococcus

sp.

Streptococcus

sp.

Streptomyces

sp.

Synechocystis

sp.

Thermotoga

sp.

Vagococcus

fluvialis

Vagococcus

penaei

Vibrio

alginolyticus

Vibrio

aestuarianus

Vibrio

aesturianus

Vibrio

carchariae

Vibrio

cholerae

Vibrio

diabolicus

Vibrio

fisheri

Vibrio

fluvialis

Vibrio

parahaemolyticus

Vibrio

splendidus

Vibrio

vulnificus

Wolbachia

sp.

Xanthomonas

sp.

Xylella

fastidiosa

Yersinia

aldovae

Yersinia

aleksiciae

Yersinia

bercovieri

Yersinia

enterolitica

Yersinia

entomophaga

Yersinia

frederiksenii

Yersinia

intermedia

Yersinia

kristensenii

Yersinia

massiliensis

Yersinia

mollaretii

Yersinia

nurmii

Yersinia

pekkanenii

Yersinia

pestis

Yersinia

pseudotuberculosis

Yersinia

rohdei

Yersinia

ruckeri

Yersinia

similis

Yersinia

wautersii

PROCARYOTES

CYANOBACTÉRIES

Anabaena

sp.

Anabaena

flos-aquae

Aphanizomenon

sp

Arthrospira

sp

Calothrix

sp

Chameasiphon

sp

Chlorogloeopsis

sp

Chloococcidiopsis

sp

Crinalium

sp

Cyanobium

sp

Cyanothece

sp

Cylindrospermum

sp

Fischerella

sp

Geitlerinema

sp

Geminocystis

sp

Gloeobacter

sp

Gloeocapsa

sp

Gloeothece

sp

Halothece

sp

Kamptonema

sp.

Leptolyngbya

sp.

Michrocaete

sp.

Microcystis

aeruginosa

Nostoc

sp.

Oscillatoria

sp.

Planktothrix

sp.

Pleurocapsa

sp.

Prochrorococcus

marinus

Prochlorothrix

sp.

Rivularia

sp.

Synechococcus

elongatus

Synechococcus

leopoliensis

Synechocystis

sp.

Tolypothrix

sp.

Trichodesmium

erythraeum

PROCARYOTES ARCHEES

Acidianus

sp.

Aeropyrum

sp.

Pyrobaculum

sp.

Pyrococcus

sp.

Sulfolobus

sp.

Thermococus

sp.

PHYTOPLANCTON

Alexandrium

sp

Amphidoma

sp.

Auxenochlorella

protothecoides

Azadinium

sp.

Chlamydomonas

reinhardtii

Chlorella

sorokiniana

Cochlodinium

polykrikoides

Dinophysis

sp.

Dinophysis

sp.

Emiliania

huxleyi

Gambierdiscus

sp.

Hemiselmis

sp.

Heterocapsa

triquetra

Heterosigma

akashiwo

Isochrysis

galbana

Karenia

sp.

Karlodinium

sp.

Lingulodinium

polyedrum

Mesodinium

rubrum

Ostreococcus

tauri

Ostreopsis

ovata

Phaeodactylum

tricornutum

Polytomella

sp.

Prorocentrum

sp.

Proteomonas

sp.

Protoceratium

reticulatum

Pseudo-nitzschia

sp.

Rhinomonas

sp.

Rhodomonas

sp.

Scripsiella

trochoïdea

Teleaulax

sp.

Thalassiosira

pseudonana

Tisochrysis

lutea

Vulcanodinium

rugosum

PLANTES

Alnus

glutinosa

Acacia

mangium

Amborella

trichopoda

Ambrosia

artemisiifolia

Ambrosia

maritima

Ambrosia

psilostachya

Ambrosia

tenuifolia

Ambrosia

trifida

Arabidopsis

thaliana

Beta

vulgaris

Betula

pendula

Brachypodium

distachyon

Brassica

napus

Brassica

rappa

Citrus

sp.

Coffea

canephora

Coffea

arabica

Daucus

carota

Desmodus

subsp.icatus

Elaeis

guineensis

Erythranthe

guttata

Eucalyptus

grandis

Ficus

sp.

Fragaria

vesca

Gossypum

arboreum

Gycine

max

Helianthus

anuus

Hevea

brasiliensis

Hordeum

sp.

Lemna

gibba

Linum

usitatissimum

Lotus

japonicus

Malus

sp.

Marchantia

polymorpha

Medicago

truncatula

Mimulus

guttatus

Musa

sp.

Nicotiana

tabacum

Oryza

sp.

Physcomitrella

patens

Pinus

sp.

Pisum

sativum

Populus

trichocarpa

Prunus

sp.

Pseudokirchneriella

subapicata

Quercus

sp.

Raphidocelis

subcapitata

Saccharum

sp.

Salix

sp.

Secale

sp.

Selaginella

moellendorffii

Senecio

sp.

Setaria

viridis

Silene

sp.

Solanum

lycopersicum

Solanum

melongena

Theobroma

cacao

Triticum

aestivum

Triticum

durum

Vanilla

planifolia

Vitis

sp.

Zea

mays

FUNGI

Agaricus

bisporus

Aphanomyces

astaci

Aspergillus

brasiliensis

Aspergillus

flavus

Aspergillus

fumigatus

Aspergillus

nidulans

Aspergillus

niger

Boletus

edulis

Botrytis

cinerea

Candida

albicans

Candida

glabrata

Candida

krusei

Candida

tropicalis

Claviceps

purpurea

Clavisp.ora

lusitaniae

Colletotrichum

gloeosporioides

Colletotrichum

musae

Coprinopsis

cinerea

Coprinus

cinereus

Cryptococcus

neoformans

Debaryomyces

hansenii

Eremothecium

gossypii

Eurotium

rubrum

Fomitopsis

pinicola

Fusarium

culmorum

Fusarium

graminearum

Fusarium

verticillioides

Geotrichum

candidum

Heterobasidion

annosum

Kluyveromyces

lactis

Kluyveromyces

marxianus

Laccaria

sp.

Lentinula

edodes

Lipomyces

starkeyi

Malassezia

furfur

Melampsora

larici-populina

Mucor

circinelloides

Mycosphaerella

musicola

Mycosphaerella

fijiensis

Neurospora

crassa

Ogataea

polymorpha

Penicillium

chrysogenum

Penicillium

expansum

enicillium

verrucosum

Penicillium

roqueforti

Penicillium

camemberti

Phycomyces

blakesleeanus

Phanerochaete

chrysosporium

Podospora

anserina

Puccinia

graminis fsp tritici

Pycnoporus

cinnabarinus

Rhizopus

arrhizus

Rhodotorula

mucilaginosa

Saccharomyces

cerevisiae

Saccharomyces

uvarum

Saccharomyces

carlsbergensis

Scedosporium

apiospermum

Scheffersomyces

stipitis

Schizophyllum

commune

Schizosaccharomyces

pombe

Serpula

lacrymans

Torulaspora

delbrueckii

Trametes

versicolor

Trichoderma

reesei

Trichoderma

viride

Trichoderma

atroviride

Ustilago

maydis

Venturia

inaequalis

Yarrowia

lipolytica

Zygosaccharomyces

rouxii

ANIMAUX INVERTÉBRÉS

Achantocheilonema

viteae

Acizia

uncatoides

Acyrthosiphon

pisum

Adalia

bipunctata

Aedes

aegypti

Aedes

albopictus

Aleurodicus

dispersus

Anopheles

albimanus

Anopheles

aquasalis

Anopheles

arabiensis

Anopheles

darlingi

Anopheles

funestus

Anopheles

gambiae

Anopheles

sinensis

Anopheles

stephensi

Aphis

gossypii

Apis

mellifera

Aplysia

californica

Arbacia

punctulata

Armadillidium

nasatum

Asellus

sp.

Asobara

tabida

Astacus

sp.

Austropotamobius

sp.

Batrocera

sp,

Bemisia

tabaci

Brachionus

calyciflorus

Brugia

sp.

Bursaphelenchus

xylophilus

Busseola

fusca

Busseola

phaia

Busseola

segeta

Caenorhabditis

elegans

Callosobruchus

maculatus

Cantareus

aspersus

Ceratitis

sp.

Cerodaphnia

dubia

Chilo

partellus

Chilo

sacchariphagus

Chironomus

riparius

Chorthippus

parallelus

Cibdela

janthina

Cicadulina

sp.

Ciona

intestinalis

Coelopidae

sp.

Crassostrea

sp.

Culex

pipens

Culex

quinquefasciatus

Dacus

sp.

Daphnia

magna

Daphnia

sp.

Diopsidae

sp.

Dirofilaria

immitis

Dirofilaria

repens

Ditylenchus

dipsaci

Drosophila

suzukii

Drosophila

melanogaster

Echinococcus

multilocularis

Eisenia

fetida

Encarsia

sp.

Eretmocerus

sp.

Euprymna

scolopes

Folsomia

candida

Fopius

arisanus

Galleria

sp.

Globodera

pallida

Globodera

rostochiensis

Glycaspis

brimblecombei

Gryllus

bimaculatus

Harmonia

axyridis

Heliconius

sp.

Helicoverpa

armigera

Helix

pomatia

Hermetia

illucens

Heterodera

schachtii

Hydra

attenuata

Hydra

sp.

Limulus

polyphemus

Litomosoides

sigmodontis

Loa

loa

Locusta

migratoria

Loligo

pealei

Lymnaea

stagnalis

Macrostomum

lignano

Mansonella

ozzardi

Mansonella

perstans

Mansonella

streptocerca

Melanaphis

sp.

Meloidogyne

incognita

Mnemiopsis

leidyi

Mytilus

edulis

Mytilus

galloprovincialis

Nasonia

vtripennis

Navicula

pelliculosa

Neoceratitis

sp.

Nesidiocoris

sp.

Nucella

lapillus

Onchocerca

sp.

Orconectes

sp.

Ostrea

sp.

Ostrinia

nubilalis

Pacifastacus

sp.

Paracoccus

marginatus

Paysandisia

archon

Perigrinus

maïdis

Physa

acuta

Platynereis

dumerilii

Pocillopora

sp.

Porcellio

dilatatus

Porcellionides

pruinosus

Pristionchus

pacificus

Procambarus

clarkii

Psyttalia

fletcheri

Radopholus

similis

Rhodnius

prolixus

Rhodnius

robustus

Scathophaga

stercoraria

Schistocerca

gregaria

Sesamia

calamistis

Sesamia

nonagrioides

Spodoptera

frugiperda

Spodoptera

littoralis

Spodoptera

exigua

Strongylocentrotus

purpuratus

Tapes

philippinarum

Tenebrio

molitor

Tetranychus

urticae

Thaumetopoea

pityocampa

Thaumetopoea

spp

Thysanoptera

sp.

Trialeurodes

vaporariorum

Triatoma

brasiliensis

Tribolium

castaneum

Trichogramma

sp.

Tubifex

tubifex

Tuta

absoluta

Varroa destructor

sp.

Vespa

velutina

Wuchereria

bancrofti

Xylocopinae

sp.

Zaprionus

indianus

Zeugodacus

sp.

ANIMAUX VERTÉBRÉS

Acipenser

baerii

Anas

platyrhynchos

Anolis

carolinensis

Anser

anser domesticus

Apodemus

flavicollis

Apodemus

sylvaticus

Ardeotis

kori

Argyrosomus

regius

Arvicola

sherman

Arvicola

terrestris

Bombina

variegata

Bos

taurus

Brachydanio

rerio

Cairina

moschata

Callithrix

jacchus

Canis

lupus

Canis

lupus familiaris

Capra

hircus

Cavia

porcellus

Cervus

sp.

Columba

domestica

Columba

livia

Coturnix

coturnix

Coturnix

japonica

Cyanistes

caeruleus

Cyprinus

carpio

Dicentrarchus

labrax

Equus

asinus

Equus

caballus

Felis

sylvestris catus

Gallus

gallus

Gasterosteus

aculeatus

Lama

glama

Marmota

marmota

Meleagris

gallopavo

Meriones

unguiculatus

Mesocricetus

auratus

Microtus

agrestis

Microtus

arvalis

Mus

musculus

Mustela

putorius furo

Myodes

glareolus

Nothobranchius

furzeri

Numida

meleagris

Oncorhynchus

mykiss

Oreochromis

aureus

Oryctolagus

cuniculus

Oryzias

melastigma

Ovis

aries

Parus

major

Passer

domesticus

Pelophylax

kl esculentus

Rattus

norvegicus

Rattus

rattus

Salmo

Salar

Salmo

trutta

Scophthalmus

maximus

Scyliorhinus

canicula

Serinus

canaria

Solea

solea

Sorex

araneus

Sorex

coronatus

Sparus

aurata

Spondyliosoma

cantharus

Sus

domesticus scrofa

Vulpes

vulpes

Xenopus

laevis

Zootoca

vivipara